INFO
Name: samtools
Version: 1.23.1-1.el10_2
Arch: aarch64
Summary: Tools for nucleotide sequence alignments in the SAM format
License: MIT
Vendor: Fedora Project
Build Host: buildvm-a64-34.rdu3.fedoraproject.org
Build Date: Thu Mar 19 12:33:14 2026
Size: 1859161
URL: http://www.htslib.org/
Description: SAM (Sequence Alignment/Map) is a flexible generic format for storing
nucleotide sequence alignment.
SAM Tools provide various utilities for manipulating alignments in the
SAM format, including sorting, merging, indexing and generating
alignments in a per-position format.
FILES
/usr/bin/ace2sam
/usr/bin/blast2sam.pl
/usr/bin/bowtie2sam.pl
/usr/bin/export2sam.pl
/usr/bin/fasta-sanitize.pl
/usr/bin/interpolate_sam.pl
/usr/bin/maq2sam-long
/usr/bin/maq2sam-short
/usr/bin/md5fa
/usr/bin/md5sum-lite
/usr/bin/novo2sam.pl
/usr/bin/plot-ampliconstats
/usr/bin/plot-bamstats
/usr/bin/psl2sam.pl
/usr/bin/sam2vcf.pl
/usr/bin/samtools
/usr/bin/samtools.pl
/usr/bin/seq_cache_populate.pl
/usr/bin/soap2sam.pl
/usr/bin/wgsim
/usr/bin/wgsim_eval.pl
/usr/bin/zoom2sam.pl
/usr/lib/.build-id
/usr/lib/.build-id/09
/usr/lib/.build-id/09/2ca9055ef685d4f31eb4241cf262a880d7f272
/usr/lib/.build-id/14
/usr/lib/.build-id/14/e903bd79b0bbd5caec147e403e55e0b1768727
/usr/lib/.build-id/42
/usr/lib/.build-id/42/cc2da3a1267040b71edfc66295a4aedfb621dd
/usr/lib/.build-id/52
/usr/lib/.build-id/52/77b817db8f8c9d8aa7641c9e1d1488ac01094f
/usr/lib/.build-id/62
/usr/lib/.build-id/62/60bd65966e4f509f0d17831ef307278bffd580
/usr/lib/.build-id/81
/usr/lib/.build-id/81/35337b42c28ad2f06b59d7cfac50802857e51f
/usr/lib/.build-id/f8
/usr/lib/.build-id/f8/4351183e85c9d71d0f84749e324fcf28203700
/usr/share/doc/samtools
/usr/share/doc/samtools/AUTHORS
/usr/share/doc/samtools/ChangeLog.old
/usr/share/doc/samtools/NEWS.md
/usr/share/doc/samtools/examples
/usr/share/doc/samtools/examples/00README.txt
/usr/share/doc/samtools/examples/ex1.fa
/usr/share/doc/samtools/examples/ex1.sam.gz
/usr/share/doc/samtools/examples/toy.fa
/usr/share/doc/samtools/examples/toy.sam
/usr/share/licenses/samtools
/usr/share/licenses/samtools/LICENSE
/usr/share/man/man1/samtools-addreplacerg.1.gz
/usr/share/man/man1/samtools-ampliconclip.1.gz
/usr/share/man/man1/samtools-ampliconstats.1.gz
/usr/share/man/man1/samtools-bedcov.1.gz
/usr/share/man/man1/samtools-calmd.1.gz
/usr/share/man/man1/samtools-cat.1.gz
/usr/share/man/man1/samtools-checksum.1.gz
/usr/share/man/man1/samtools-collate.1.gz
/usr/share/man/man1/samtools-consensus.1.gz
/usr/share/man/man1/samtools-coverage.1.gz
/usr/share/man/man1/samtools-cram-size.1.gz
/usr/share/man/man1/samtools-depad.1.gz
/usr/share/man/man1/samtools-depth.1.gz
/usr/share/man/man1/samtools-dict.1.gz
/usr/share/man/man1/samtools-faidx.1.gz
/usr/share/man/man1/samtools-fasta.1.gz
/usr/share/man/man1/samtools-fastq.1.gz
/usr/share/man/man1/samtools-fixmate.1.gz
/usr/share/man/man1/samtools-flags.1.gz
/usr/share/man/man1/samtools-flagstat.1.gz
/usr/share/man/man1/samtools-fqidx.1.gz
/usr/share/man/man1/samtools-head.1.gz
/usr/share/man/man1/samtools-idxstats.1.gz
/usr/share/man/man1/samtools-import.1.gz
/usr/share/man/man1/samtools-index.1.gz
/usr/share/man/man1/samtools-markdup.1.gz
/usr/share/man/man1/samtools-merge.1.gz
/usr/share/man/man1/samtools-mpileup.1.gz
/usr/share/man/man1/samtools-phase.1.gz
/usr/share/man/man1/samtools-quickcheck.1.gz
/usr/share/man/man1/samtools-reference.1.gz
/usr/share/man/man1/samtools-reheader.1.gz
/usr/share/man/man1/samtools-reset.1.gz
/usr/share/man/man1/samtools-rmdup.1.gz
/usr/share/man/man1/samtools-samples.1.gz
/usr/share/man/man1/samtools-sort.1.gz
/usr/share/man/man1/samtools-split.1.gz
/usr/share/man/man1/samtools-stats.1.gz
/usr/share/man/man1/samtools-targetcut.1.gz
/usr/share/man/man1/samtools-tview.1.gz
/usr/share/man/man1/samtools-view.1.gz
/usr/share/man/man1/samtools.1.gz
/usr/share/man/man1/wgsim.1.gz
REQUIRES
/usr/bin/perl
ld-linux-aarch64.so.1()(64bit)
ld-linux-aarch64.so.1(GLIBC_2.17)(64bit)
libc.so.6()(64bit)
libc.so.6(GLIBC_2.17)(64bit)
libc.so.6(GLIBC_2.33)(64bit)
libc.so.6(GLIBC_2.34)(64bit)
libc.so.6(GLIBC_ABI_DT_RELR)(64bit)
libhts.so.3()(64bit)
libhts.so.3(HTSLIB_1.0)(64bit)
libhts.so.3(HTSLIB_1.1)(64bit)
libhts.so.3(HTSLIB_1.10)(64bit)
libhts.so.3(HTSLIB_1.11)(64bit)
libhts.so.3(HTSLIB_1.12)(64bit)
libhts.so.3(HTSLIB_1.14)(64bit)
libhts.so.3(HTSLIB_1.15)(64bit)
libhts.so.3(HTSLIB_1.16)(64bit)
libhts.so.3(HTSLIB_1.17)(64bit)
libhts.so.3(HTSLIB_1.18)(64bit)
libhts.so.3(HTSLIB_1.2.1)(64bit)
libhts.so.3(HTSLIB_1.21)(64bit)
libhts.so.3(HTSLIB_1.22)(64bit)
libhts.so.3(HTSLIB_1.23)(64bit)
libhts.so.3(HTSLIB_1.3)(64bit)
libhts.so.3(HTSLIB_1.4)(64bit)
libhts.so.3(HTSLIB_1.5)(64bit)
libhts.so.3(HTSLIB_1.6)(64bit)
libhts.so.3(HTSLIB_1.7)(64bit)
libhts.so.3(HTSLIB_1.9)(64bit)
libm.so.6()(64bit)
libm.so.6(GLIBC_2.17)(64bit)
libm.so.6(GLIBC_2.29)(64bit)
libncursesw.so.6()(64bit)
libtinfo.so.6()(64bit)
libz.so.1()(64bit)
rpmlib(CompressedFileNames) 3.0.4-1
rpmlib(FileDigests) 4.6.0-1
rpmlib(PayloadFilesHavePrefix) 4.0-1
rpmlib(PayloadIsZstd) 5.4.18-1
rtld(GNU_HASH)
PROVIDES
samtools 1.23.1-1.el10_2
samtools(aarch-64) 1.23.1-1.el10_2
CONFIG FILES
/usr/bin/ace2sam
/usr/bin/blast2sam.pl
/usr/bin/bowtie2sam.pl
/usr/bin/export2sam.pl
/usr/bin/fasta-sanitize.pl
/usr/bin/interpolate_sam.pl
/usr/bin/maq2sam-long
/usr/bin/maq2sam-short
/usr/bin/md5fa
/usr/bin/md5sum-lite
/usr/bin/novo2sam.pl
/usr/bin/plot-ampliconstats
/usr/bin/plot-bamstats
/usr/bin/psl2sam.pl
/usr/bin/sam2vcf.pl
/usr/bin/samtools
/usr/bin/samtools.pl
/usr/bin/seq_cache_populate.pl
/usr/bin/soap2sam.pl
/usr/bin/wgsim
/usr/bin/wgsim_eval.pl
/usr/bin/zoom2sam.pl
/usr/lib/.build-id a
/usr/lib/.build-id/09 a
/usr/lib/.build-id/09/2ca9055ef685d4f31eb4241cf262a880d7f272 a
/usr/lib/.build-id/14 a
/usr/lib/.build-id/14/e903bd79b0bbd5caec147e403e55e0b1768727 a
/usr/lib/.build-id/42 a
/usr/lib/.build-id/42/cc2da3a1267040b71edfc66295a4aedfb621dd a
/usr/lib/.build-id/52 a
/usr/lib/.build-id/52/77b817db8f8c9d8aa7641c9e1d1488ac01094f a
/usr/lib/.build-id/62 a
/usr/lib/.build-id/62/60bd65966e4f509f0d17831ef307278bffd580 a
/usr/lib/.build-id/81 a
/usr/lib/.build-id/81/35337b42c28ad2f06b59d7cfac50802857e51f a
/usr/lib/.build-id/f8 a
/usr/lib/.build-id/f8/4351183e85c9d71d0f84749e324fcf28203700 a
/usr/share/doc/samtools
/usr/share/doc/samtools/AUTHORS d
/usr/share/doc/samtools/ChangeLog.old d
/usr/share/doc/samtools/NEWS.md d
/usr/share/doc/samtools/examples
/usr/share/doc/samtools/examples/00README.txt d
/usr/share/doc/samtools/examples/ex1.fa d
/usr/share/doc/samtools/examples/ex1.sam.gz d
/usr/share/doc/samtools/examples/toy.fa d
/usr/share/doc/samtools/examples/toy.sam d
/usr/share/licenses/samtools
/usr/share/licenses/samtools/LICENSE l
/usr/share/man/man1/samtools-addreplacerg.1.gz d
/usr/share/man/man1/samtools-ampliconclip.1.gz d
/usr/share/man/man1/samtools-ampliconstats.1.gz d
/usr/share/man/man1/samtools-bedcov.1.gz d
/usr/share/man/man1/samtools-calmd.1.gz d
/usr/share/man/man1/samtools-cat.1.gz d
/usr/share/man/man1/samtools-checksum.1.gz d
/usr/share/man/man1/samtools-collate.1.gz d
/usr/share/man/man1/samtools-consensus.1.gz d
/usr/share/man/man1/samtools-coverage.1.gz d
/usr/share/man/man1/samtools-cram-size.1.gz d
/usr/share/man/man1/samtools-depad.1.gz d
/usr/share/man/man1/samtools-depth.1.gz d
/usr/share/man/man1/samtools-dict.1.gz d
/usr/share/man/man1/samtools-faidx.1.gz d
/usr/share/man/man1/samtools-fasta.1.gz d
/usr/share/man/man1/samtools-fastq.1.gz d
/usr/share/man/man1/samtools-fixmate.1.gz d
/usr/share/man/man1/samtools-flags.1.gz d
/usr/share/man/man1/samtools-flagstat.1.gz d
/usr/share/man/man1/samtools-fqidx.1.gz d
/usr/share/man/man1/samtools-head.1.gz d
/usr/share/man/man1/samtools-idxstats.1.gz d
/usr/share/man/man1/samtools-import.1.gz d
/usr/share/man/man1/samtools-index.1.gz d
/usr/share/man/man1/samtools-markdup.1.gz d
/usr/share/man/man1/samtools-merge.1.gz d
/usr/share/man/man1/samtools-mpileup.1.gz d
/usr/share/man/man1/samtools-phase.1.gz d
/usr/share/man/man1/samtools-quickcheck.1.gz d
/usr/share/man/man1/samtools-reference.1.gz d
/usr/share/man/man1/samtools-reheader.1.gz d
/usr/share/man/man1/samtools-reset.1.gz d
/usr/share/man/man1/samtools-rmdup.1.gz d
/usr/share/man/man1/samtools-samples.1.gz d
/usr/share/man/man1/samtools-sort.1.gz d
/usr/share/man/man1/samtools-split.1.gz d
/usr/share/man/man1/samtools-stats.1.gz d
/usr/share/man/man1/samtools-targetcut.1.gz d
/usr/share/man/man1/samtools-tview.1.gz d
/usr/share/man/man1/samtools-view.1.gz d
/usr/share/man/man1/samtools.1.gz d
/usr/share/man/man1/wgsim.1.gz d
LICENSE FILES
MIT
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