Metadata for bcftools-1.23.1-1.el10_2.x86_64.rpm

0 directories 0 files
Go up

INFO

Name: bcftools
Version: 1.23.1-1.el10_2
Arch: x86_64
Summary: Tools for genomic variant calling and manipulating VCF/BCF files
License: GPL-3.0-or-later
Vendor: Fedora Project
Build Host: buildvm-x86-17.rdu3.fedoraproject.org
Build Date: Thu Mar 19 12:36:11 2026
Size: 3243194
URL: https://www.htslib.org/
Description: BCFtools is a set of utilities that manipulate genomic variant calls in the
Variant Call Format (VCF) and its binary counterpart (BCF). All commands work
transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.

(This BCFtools includes the polysomy subcommand, which is implemented using
the GNU Scientific Library. Hence this package is licensed according to the
GNU General Public License, rather than the MIT license used when BCFtools
is built without the polysomy subcommand.)

FILES

/usr/bin/bcftools
/usr/bin/color-chrs.pl
/usr/bin/gff2gff
/usr/bin/gff2gff.py
/usr/bin/guess-ploidy.py
/usr/bin/plot-roh.py
/usr/bin/plot-vcfstats
/usr/bin/roh-viz
/usr/bin/run-roh.pl
/usr/bin/vcfutils.pl
/usr/bin/vrfs-variances
/usr/lib/.build-id
/usr/lib/.build-id/06
/usr/lib/.build-id/06/515af13a66939f350c704242827e7d4c6afbfd
/usr/lib/.build-id/12
/usr/lib/.build-id/12/69393a515eac7c3f1d2ecc5ed8182986b8862e
/usr/lib/.build-id/19
/usr/lib/.build-id/19/21f723f63efd1a05607eeb470a2c0976614269
/usr/lib/.build-id/1e
/usr/lib/.build-id/1e/2f9bd6009ba29835becba9b9dafc0fc11d04d1
/usr/lib/.build-id/22
/usr/lib/.build-id/22/214581fa7c55af458b66bec05b8c0526acf1cc
/usr/lib/.build-id/2e
/usr/lib/.build-id/2e/e25952411af51dd2abe319fd5b9f6368242073
/usr/lib/.build-id/32
/usr/lib/.build-id/32/9a2d6f50ce6ff94d87b93d435213a600cef839
/usr/lib/.build-id/32/e23c746dab6439bd36e032422f77737b1df6d0
/usr/lib/.build-id/4b
/usr/lib/.build-id/4b/ebdbb29f205999be0751fddbc8779d3066364e
/usr/lib/.build-id/58
/usr/lib/.build-id/58/839c52ecc0e97114825d040e65574f007d9c99
/usr/lib/.build-id/5a
/usr/lib/.build-id/5a/400d6a797759fe8439e68b1e57d60371f75d8c
/usr/lib/.build-id/5a/e8694b15830a3d38c09ab46cb497c03f35388c
/usr/lib/.build-id/5b
/usr/lib/.build-id/5b/37cd43b23cb5fd457aa581fecdb4bfd7ecce62
/usr/lib/.build-id/63
/usr/lib/.build-id/63/88a465c6e07d403da820fe1b44af0be618a221
/usr/lib/.build-id/68
/usr/lib/.build-id/68/ea7920da3342e142fd0dbb25a10869474ccf66
/usr/lib/.build-id/77
/usr/lib/.build-id/77/e1690e9b27c5906606f76788a70fe6b187c2c3
/usr/lib/.build-id/88
/usr/lib/.build-id/88/6238198d376f219981621ca32c7d5f3c87c1bb
/usr/lib/.build-id/89
/usr/lib/.build-id/89/5bf8eff7d62401623394012b83c783540083f8
/usr/lib/.build-id/8a
/usr/lib/.build-id/8a/97431379b36eb91c1a7f9343daf9d0185c6077
/usr/lib/.build-id/9a
/usr/lib/.build-id/9a/3a0870e8b6885cf04bd5abe43609666885702d
/usr/lib/.build-id/9a/81c1927433d4cd49fa7eaa40c5b4a956215ff3
/usr/lib/.build-id/9e
/usr/lib/.build-id/9e/6fb5ca84cd0e8de41652e67f0c89d32bcf3f40
/usr/lib/.build-id/9f
/usr/lib/.build-id/9f/7c9ff378917cd6b670786b7870c4117510a357
/usr/lib/.build-id/a1
/usr/lib/.build-id/a1/ada2db4d24b2ac6cdddf3c802724fe2ec181b1
/usr/lib/.build-id/a9
/usr/lib/.build-id/a9/d3759c49ff91d5fd72e28b0b9159d21f249124
/usr/lib/.build-id/ad
/usr/lib/.build-id/ad/4dc76915041e7bff89d4d5991ead16e30da0ea
/usr/lib/.build-id/b4
/usr/lib/.build-id/b4/dbf2fcf69dfc0826fcb12de20ea96ceb5ab140
/usr/lib/.build-id/b5
/usr/lib/.build-id/b5/8e16b5be60598880045381d44903f1a962bfd1
/usr/lib/.build-id/be
/usr/lib/.build-id/be/141fc00ea25fe87a5f6492e79f4d5c0c7e9a68
/usr/lib/.build-id/c1
/usr/lib/.build-id/c1/b6d8c03300e4306e69dbf62933d97407434400
/usr/lib/.build-id/cb
/usr/lib/.build-id/cb/08905da11138275e7fe35eca262ddd5472652f
/usr/lib/.build-id/cf
/usr/lib/.build-id/cf/be1bf7b885424977d8eef45fbb33f77e3efe9a
/usr/lib/.build-id/d0
/usr/lib/.build-id/d0/5b9437e6ba0d30a04b707ce4357e2125da7f53
/usr/lib/.build-id/da
/usr/lib/.build-id/da/7a459a048c4ad0613616e022f242c57622966a
/usr/lib/.build-id/db
/usr/lib/.build-id/db/48060107bdc6f22b82e0b501d1c490f4dda9b2
/usr/lib/.build-id/e0
/usr/lib/.build-id/e0/e6d7a5b023eb8f9a3f96ed2968bd5c0803c9ad
/usr/lib/.build-id/e0/f0e450ead8aea2f4eecd5521b1c2f4bebc2d67
/usr/lib/.build-id/e3
/usr/lib/.build-id/e3/73d583645b0a23a20b893df3a0372dd9808560
/usr/lib/.build-id/f1
/usr/lib/.build-id/f1/d1d1d4f3ab912c494598b55a2caec945e42d5e
/usr/lib/.build-id/fb
/usr/lib/.build-id/fb/41d8febd1b129628705391eccacc9d351cd7c7
/usr/lib/.build-id/fb/9cbf9569803a550c4e7c52982a1b21f199e094
/usr/lib/.build-id/fc
/usr/lib/.build-id/fc/11504f269f3c9686dec323344933c5387aa494
/usr/libexec/bcftools
/usr/libexec/bcftools/GTisec.so
/usr/libexec/bcftools/GTsubset.so
/usr/libexec/bcftools/ad-bias.so
/usr/libexec/bcftools/add-variantkey.so
/usr/libexec/bcftools/af-dist.so
/usr/libexec/bcftools/allele-length.so
/usr/libexec/bcftools/check-ploidy.so
/usr/libexec/bcftools/check-sparsity.so
/usr/libexec/bcftools/color-chrs.so
/usr/libexec/bcftools/contrast.so
/usr/libexec/bcftools/counts.so
/usr/libexec/bcftools/dosage.so
/usr/libexec/bcftools/fill-AN-AC.so
/usr/libexec/bcftools/fill-from-fasta.so
/usr/libexec/bcftools/fill-tags.so
/usr/libexec/bcftools/fixploidy.so
/usr/libexec/bcftools/fixref.so
/usr/libexec/bcftools/frameshifts.so
/usr/libexec/bcftools/guess-ploidy.so
/usr/libexec/bcftools/gvcfz.so
/usr/libexec/bcftools/impute-info.so
/usr/libexec/bcftools/indel-stats.so
/usr/libexec/bcftools/isecGT.so
/usr/libexec/bcftools/mendelian2.so
/usr/libexec/bcftools/missing2ref.so
/usr/libexec/bcftools/parental-origin.so
/usr/libexec/bcftools/prune.so
/usr/libexec/bcftools/remove-overlaps.so
/usr/libexec/bcftools/scatter.so
/usr/libexec/bcftools/setGT.so
/usr/libexec/bcftools/smpl-stats.so
/usr/libexec/bcftools/split-vep.so
/usr/libexec/bcftools/split.so
/usr/libexec/bcftools/tag2tag.so
/usr/libexec/bcftools/trio-dnm2.so
/usr/libexec/bcftools/trio-stats.so
/usr/libexec/bcftools/trio-switch-rate.so
/usr/libexec/bcftools/variant-distance.so
/usr/libexec/bcftools/variantkey-hex.so
/usr/libexec/bcftools/vcf2table.so
/usr/libexec/bcftools/vrfs.so
/usr/share/doc/bcftools
/usr/share/doc/bcftools/AUTHORS
/usr/share/doc/bcftools/NEWS
/usr/share/licenses/bcftools
/usr/share/licenses/bcftools/LICENSE
/usr/share/man/man1/bcftools.1.gz

REQUIRES

/usr/bin/perl
/usr/bin/python3
libc.so.6()(64bit)
libc.so.6(GLIBC_2.14)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libc.so.6(GLIBC_2.3)(64bit)
libc.so.6(GLIBC_2.3.4)(64bit)
libc.so.6(GLIBC_2.33)(64bit)
libc.so.6(GLIBC_2.34)(64bit)
libc.so.6(GLIBC_2.38)(64bit)
libc.so.6(GLIBC_2.4)(64bit)
libc.so.6(GLIBC_2.7)(64bit)
libc.so.6(GLIBC_ABI_DT_RELR)(64bit)
libgsl.so.27()(64bit)
libgslcblas.so.0()(64bit)
libhts.so.3()(64bit)
libhts.so.3(HTSLIB_1.0)(64bit)
libhts.so.3(HTSLIB_1.1)(64bit)
libhts.so.3(HTSLIB_1.10)(64bit)
libhts.so.3(HTSLIB_1.13)(64bit)
libhts.so.3(HTSLIB_1.16)(64bit)
libhts.so.3(HTSLIB_1.17)(64bit)
libhts.so.3(HTSLIB_1.2.1)(64bit)
libhts.so.3(HTSLIB_1.22)(64bit)
libhts.so.3(HTSLIB_1.3)(64bit)
libhts.so.3(HTSLIB_1.4)(64bit)
libhts.so.3(HTSLIB_1.5)(64bit)
libhts.so.3(HTSLIB_1.6)(64bit)
libhts.so.3(HTSLIB_1.7)(64bit)
libm.so.6()(64bit)
libm.so.6(GLIBC_2.2.5)(64bit)
libm.so.6(GLIBC_2.23)(64bit)
libm.so.6(GLIBC_2.29)(64bit)
libperl.so.5.40()(64bit)
rpmlib(CompressedFileNames) 3.0.4-1
rpmlib(FileDigests) 4.6.0-1
rpmlib(PayloadFilesHavePrefix) 4.0-1
rpmlib(PayloadIsZstd) 5.4.18-1
rtld(GNU_HASH)

PROVIDES

bcftools 1.23.1-1.el10_2
bcftools(x86-64) 1.23.1-1.el10_2

CONFIG FILES

/usr/bin/bcftools
/usr/bin/color-chrs.pl
/usr/bin/gff2gff
/usr/bin/gff2gff.py
/usr/bin/guess-ploidy.py
/usr/bin/plot-roh.py
/usr/bin/plot-vcfstats
/usr/bin/roh-viz
/usr/bin/run-roh.pl
/usr/bin/vcfutils.pl
/usr/bin/vrfs-variances
/usr/lib/.build-id a
/usr/lib/.build-id/06 a
/usr/lib/.build-id/06/515af13a66939f350c704242827e7d4c6afbfd a
/usr/lib/.build-id/12 a
/usr/lib/.build-id/12/69393a515eac7c3f1d2ecc5ed8182986b8862e a
/usr/lib/.build-id/19 a
/usr/lib/.build-id/19/21f723f63efd1a05607eeb470a2c0976614269 a
/usr/lib/.build-id/1e a
/usr/lib/.build-id/1e/2f9bd6009ba29835becba9b9dafc0fc11d04d1 a
/usr/lib/.build-id/22 a
/usr/lib/.build-id/22/214581fa7c55af458b66bec05b8c0526acf1cc a
/usr/lib/.build-id/2e a
/usr/lib/.build-id/2e/e25952411af51dd2abe319fd5b9f6368242073 a
/usr/lib/.build-id/32 a
/usr/lib/.build-id/32/9a2d6f50ce6ff94d87b93d435213a600cef839 a
/usr/lib/.build-id/32/e23c746dab6439bd36e032422f77737b1df6d0 a
/usr/lib/.build-id/4b a
/usr/lib/.build-id/4b/ebdbb29f205999be0751fddbc8779d3066364e a
/usr/lib/.build-id/58 a
/usr/lib/.build-id/58/839c52ecc0e97114825d040e65574f007d9c99 a
/usr/lib/.build-id/5a a
/usr/lib/.build-id/5a/400d6a797759fe8439e68b1e57d60371f75d8c a
/usr/lib/.build-id/5a/e8694b15830a3d38c09ab46cb497c03f35388c a
/usr/lib/.build-id/5b a
/usr/lib/.build-id/5b/37cd43b23cb5fd457aa581fecdb4bfd7ecce62 a
/usr/lib/.build-id/63 a
/usr/lib/.build-id/63/88a465c6e07d403da820fe1b44af0be618a221 a
/usr/lib/.build-id/68 a
/usr/lib/.build-id/68/ea7920da3342e142fd0dbb25a10869474ccf66 a
/usr/lib/.build-id/77 a
/usr/lib/.build-id/77/e1690e9b27c5906606f76788a70fe6b187c2c3 a
/usr/lib/.build-id/88 a
/usr/lib/.build-id/88/6238198d376f219981621ca32c7d5f3c87c1bb a
/usr/lib/.build-id/89 a
/usr/lib/.build-id/89/5bf8eff7d62401623394012b83c783540083f8 a
/usr/lib/.build-id/8a a
/usr/lib/.build-id/8a/97431379b36eb91c1a7f9343daf9d0185c6077 a
/usr/lib/.build-id/9a a
/usr/lib/.build-id/9a/3a0870e8b6885cf04bd5abe43609666885702d a
/usr/lib/.build-id/9a/81c1927433d4cd49fa7eaa40c5b4a956215ff3 a
/usr/lib/.build-id/9e a
/usr/lib/.build-id/9e/6fb5ca84cd0e8de41652e67f0c89d32bcf3f40 a
/usr/lib/.build-id/9f a
/usr/lib/.build-id/9f/7c9ff378917cd6b670786b7870c4117510a357 a
/usr/lib/.build-id/a1 a
/usr/lib/.build-id/a1/ada2db4d24b2ac6cdddf3c802724fe2ec181b1 a
/usr/lib/.build-id/a9 a
/usr/lib/.build-id/a9/d3759c49ff91d5fd72e28b0b9159d21f249124 a
/usr/lib/.build-id/ad a
/usr/lib/.build-id/ad/4dc76915041e7bff89d4d5991ead16e30da0ea a
/usr/lib/.build-id/b4 a
/usr/lib/.build-id/b4/dbf2fcf69dfc0826fcb12de20ea96ceb5ab140 a
/usr/lib/.build-id/b5 a
/usr/lib/.build-id/b5/8e16b5be60598880045381d44903f1a962bfd1 a
/usr/lib/.build-id/be a
/usr/lib/.build-id/be/141fc00ea25fe87a5f6492e79f4d5c0c7e9a68 a
/usr/lib/.build-id/c1 a
/usr/lib/.build-id/c1/b6d8c03300e4306e69dbf62933d97407434400 a
/usr/lib/.build-id/cb a
/usr/lib/.build-id/cb/08905da11138275e7fe35eca262ddd5472652f a
/usr/lib/.build-id/cf a
/usr/lib/.build-id/cf/be1bf7b885424977d8eef45fbb33f77e3efe9a a
/usr/lib/.build-id/d0 a
/usr/lib/.build-id/d0/5b9437e6ba0d30a04b707ce4357e2125da7f53 a
/usr/lib/.build-id/da a
/usr/lib/.build-id/da/7a459a048c4ad0613616e022f242c57622966a a
/usr/lib/.build-id/db a
/usr/lib/.build-id/db/48060107bdc6f22b82e0b501d1c490f4dda9b2 a
/usr/lib/.build-id/e0 a
/usr/lib/.build-id/e0/e6d7a5b023eb8f9a3f96ed2968bd5c0803c9ad a
/usr/lib/.build-id/e0/f0e450ead8aea2f4eecd5521b1c2f4bebc2d67 a
/usr/lib/.build-id/e3 a
/usr/lib/.build-id/e3/73d583645b0a23a20b893df3a0372dd9808560 a
/usr/lib/.build-id/f1 a
/usr/lib/.build-id/f1/d1d1d4f3ab912c494598b55a2caec945e42d5e a
/usr/lib/.build-id/fb a
/usr/lib/.build-id/fb/41d8febd1b129628705391eccacc9d351cd7c7 a
/usr/lib/.build-id/fb/9cbf9569803a550c4e7c52982a1b21f199e094 a
/usr/lib/.build-id/fc a
/usr/lib/.build-id/fc/11504f269f3c9686dec323344933c5387aa494 a
/usr/libexec/bcftools
/usr/libexec/bcftools/GTisec.so
/usr/libexec/bcftools/GTsubset.so
/usr/libexec/bcftools/ad-bias.so
/usr/libexec/bcftools/add-variantkey.so
/usr/libexec/bcftools/af-dist.so
/usr/libexec/bcftools/allele-length.so
/usr/libexec/bcftools/check-ploidy.so
/usr/libexec/bcftools/check-sparsity.so
/usr/libexec/bcftools/color-chrs.so
/usr/libexec/bcftools/contrast.so
/usr/libexec/bcftools/counts.so
/usr/libexec/bcftools/dosage.so
/usr/libexec/bcftools/fill-AN-AC.so
/usr/libexec/bcftools/fill-from-fasta.so
/usr/libexec/bcftools/fill-tags.so
/usr/libexec/bcftools/fixploidy.so
/usr/libexec/bcftools/fixref.so
/usr/libexec/bcftools/frameshifts.so
/usr/libexec/bcftools/guess-ploidy.so
/usr/libexec/bcftools/gvcfz.so
/usr/libexec/bcftools/impute-info.so
/usr/libexec/bcftools/indel-stats.so
/usr/libexec/bcftools/isecGT.so
/usr/libexec/bcftools/mendelian2.so
/usr/libexec/bcftools/missing2ref.so
/usr/libexec/bcftools/parental-origin.so
/usr/libexec/bcftools/prune.so
/usr/libexec/bcftools/remove-overlaps.so
/usr/libexec/bcftools/scatter.so
/usr/libexec/bcftools/setGT.so
/usr/libexec/bcftools/smpl-stats.so
/usr/libexec/bcftools/split-vep.so
/usr/libexec/bcftools/split.so
/usr/libexec/bcftools/tag2tag.so
/usr/libexec/bcftools/trio-dnm2.so
/usr/libexec/bcftools/trio-stats.so
/usr/libexec/bcftools/trio-switch-rate.so
/usr/libexec/bcftools/variant-distance.so
/usr/libexec/bcftools/variantkey-hex.so
/usr/libexec/bcftools/vcf2table.so
/usr/libexec/bcftools/vrfs.so
/usr/share/doc/bcftools
/usr/share/doc/bcftools/AUTHORS d
/usr/share/doc/bcftools/NEWS d
/usr/share/licenses/bcftools
/usr/share/licenses/bcftools/LICENSE l
/usr/share/man/man1/bcftools.1.gz d

LICENSE FILES

GPL-3.0-or-later